| 1 | /* |
| 2 | * staggered_util.hpp |
| 3 | * |
| 4 | * Created on: Aug 19, 2015 |
| 5 | * Author: i-bird |
| 6 | */ |
| 7 | |
| 8 | #ifndef SRC_GRID_STAGGERED_DIST_GRID_UTIL_HPP_ |
| 9 | #define SRC_GRID_STAGGERED_DIST_GRID_UTIL_HPP_ |
| 10 | |
| 11 | #include "util/common.hpp" |
| 12 | #include "VTKWriter/VTKWriter.hpp" |
| 13 | #include "util/convert.hpp" |
| 14 | |
| 15 | |
| 16 | /*! \brief write a property that has attributes |
| 17 | * |
| 18 | * \tparam ele object we are writing |
| 19 | * \tparam vtk vtk writer |
| 20 | * \tparam true in case the basic object has attributes |
| 21 | * |
| 22 | */ |
| 23 | template<typename ele, typename vtk, bool has_attributes=has_attributes<ele>::value> |
| 24 | struct vtk_write |
| 25 | { |
| 26 | /*! \brief Add the grid with attributes name |
| 27 | * |
| 28 | * \param vtk_w VTK writer |
| 29 | * \param output where to write |
| 30 | * \param i property to write |
| 31 | * |
| 32 | */ |
| 33 | vtk_write(vtk vtk_w, const std::string output, const size_t i) |
| 34 | { |
| 35 | vtk_w.write(output + "_" + ele::attributes::name[i] + ".vtk" ,ele::attributes::name[i]); |
| 36 | } |
| 37 | }; |
| 38 | |
| 39 | /*! \brief Add to the vtk writer the key |
| 40 | * |
| 41 | * \tparam ele object we are writing |
| 42 | * \tparam vtk vtk writer |
| 43 | * \tparam false in case the basic object has not attributes |
| 44 | * |
| 45 | */ |
| 46 | template<typename ele, typename vtk> |
| 47 | struct vtk_write<ele,vtk,false> |
| 48 | { |
| 49 | /*! \brief Add the grid with attributes name |
| 50 | * |
| 51 | * \param vtk_w VTK writer |
| 52 | * \param output where to write |
| 53 | * \param i property to write |
| 54 | * |
| 55 | */ |
| 56 | vtk_write(vtk vtk_w, const std::string output, const size_t i) |
| 57 | { |
| 58 | vtk_w.write(output + "_" + std::to_string(i) + ".vtk" ,"attr" + std::to_string(i)); |
| 59 | } |
| 60 | }; |
| 61 | |
| 62 | |
| 63 | /*! \brief Classes to get the number of components of the properties |
| 64 | * |
| 65 | */ |
| 66 | template<typename T> |
| 67 | struct extends |
| 68 | { |
| 69 | /*! \brief Scalar case |
| 70 | * |
| 71 | * \return 1 component |
| 72 | * |
| 73 | */ |
| 74 | static inline size_t mul() |
| 75 | { |
| 76 | return 1; |
| 77 | } |
| 78 | |
| 79 | /*! \brief Dimensionality |
| 80 | * |
| 81 | * \return 0 |
| 82 | * |
| 83 | */ |
| 84 | static inline size_t dim() |
| 85 | { |
| 86 | return 0; |
| 87 | } |
| 88 | }; |
| 89 | |
| 90 | //! Partial specialization for N=1 1D-Array |
| 91 | template<typename T,size_t N1> |
| 92 | struct extends<T[N1]> |
| 93 | { |
| 94 | /*! \brief Vector case return N1 component |
| 95 | * |
| 96 | * \return N1 |
| 97 | * |
| 98 | */ |
| 99 | static inline size_t mul() |
| 100 | { |
| 101 | return N1; |
| 102 | } |
| 103 | |
| 104 | /*! Dimensionality 1 |
| 105 | * |
| 106 | * \return 1 |
| 107 | * |
| 108 | */ |
| 109 | static inline size_t dim() |
| 110 | { |
| 111 | return 1; |
| 112 | } |
| 113 | }; |
| 114 | |
| 115 | //! Partial specialization for N=2 2D-Array |
| 116 | template<typename T,size_t N1,size_t N2> |
| 117 | struct extends<T[N1][N2]> |
| 118 | { |
| 119 | /*! \brief Matrix case return N1*N2 component |
| 120 | * |
| 121 | * \return N1*N2 |
| 122 | * |
| 123 | */ |
| 124 | static inline size_t mul() |
| 125 | { |
| 126 | return N1 * N2; |
| 127 | } |
| 128 | |
| 129 | /*! Dimensionality 2 |
| 130 | * |
| 131 | * \return 2 |
| 132 | * |
| 133 | */ |
| 134 | static inline size_t dim() |
| 135 | { |
| 136 | return 2; |
| 137 | } |
| 138 | }; |
| 139 | |
| 140 | //! Partial specialization for N=3 |
| 141 | template<typename T,size_t N1,size_t N2,size_t N3> |
| 142 | struct extends<T[N1][N2][N3]> |
| 143 | { |
| 144 | //! number of elements |
| 145 | static inline size_t mul() |
| 146 | { |
| 147 | return N1 * N2 * N3; |
| 148 | } |
| 149 | |
| 150 | /*! number of indexes |
| 151 | * |
| 152 | * \return 3 |
| 153 | * |
| 154 | */ |
| 155 | static inline size_t dim() |
| 156 | { |
| 157 | return 3; |
| 158 | } |
| 159 | }; |
| 160 | |
| 161 | //! Partial specialization for N=4 |
| 162 | template<typename T,size_t N1,size_t N2,size_t N3,size_t N4> |
| 163 | struct extends<T[N1][N2][N3][N4]> |
| 164 | { |
| 165 | //! number of elements |
| 166 | static inline size_t mul() |
| 167 | { |
| 168 | return N1 * N2 * N3 * N4; |
| 169 | } |
| 170 | |
| 171 | /*! number of indexes |
| 172 | * |
| 173 | * \return 4 |
| 174 | * |
| 175 | */ |
| 176 | static inline size_t dim() |
| 177 | { |
| 178 | return 4; |
| 179 | } |
| 180 | }; |
| 181 | |
| 182 | //! Partial specialization for N=5 |
| 183 | template<typename T,size_t N1,size_t N2,size_t N3,size_t N4,size_t N5> |
| 184 | struct extends<T[N1][N2][N3][N4][N5]> |
| 185 | { |
| 186 | //! number of elements |
| 187 | static inline size_t mul() |
| 188 | { |
| 189 | return N1 * N2 * N3 * N4 * N5; |
| 190 | } |
| 191 | |
| 192 | /*! number of indexes |
| 193 | * |
| 194 | * \return 5 |
| 195 | * |
| 196 | */ |
| 197 | static inline size_t dim() |
| 198 | { |
| 199 | return 5; |
| 200 | } |
| 201 | }; |
| 202 | |
| 203 | //! Partial specialization for N=6 |
| 204 | template<typename T,size_t N1,size_t N2,size_t N3,size_t N4,size_t N5, size_t N6> |
| 205 | struct extends<T[N1][N2][N3][N4][N5][N6]> |
| 206 | { |
| 207 | //! number of elements |
| 208 | static inline size_t mul() |
| 209 | { |
| 210 | return N1 * N2 * N3 * N4 * N5 * N6; |
| 211 | } |
| 212 | |
| 213 | /*! number of indexes |
| 214 | * |
| 215 | * \return 6 |
| 216 | * |
| 217 | */ |
| 218 | static inline size_t dim() |
| 219 | { |
| 220 | return 6; |
| 221 | } |
| 222 | }; |
| 223 | |
| 224 | //! Partial specialization for N=7 |
| 225 | template<typename T,size_t N1,size_t N2,size_t N3,size_t N4,size_t N5, size_t N6, size_t N7> |
| 226 | struct extends<T[N1][N2][N3][N4][N5][N6][N7]> |
| 227 | { |
| 228 | //! number of elements |
| 229 | static inline size_t mul() |
| 230 | { |
| 231 | return N1 * N2 * N3 * N4 * N5 * N6 * N7; |
| 232 | } |
| 233 | |
| 234 | /*! number of indexes |
| 235 | * |
| 236 | * \return 7 |
| 237 | * |
| 238 | */ |
| 239 | static inline size_t dim() |
| 240 | { |
| 241 | return 7; |
| 242 | } |
| 243 | }; |
| 244 | |
| 245 | //! Partial specialization for N=8 |
| 246 | template<typename T,size_t N1,size_t N2,size_t N3,size_t N4,size_t N5, size_t N6, size_t N7, size_t N8> |
| 247 | struct extends<T[N1][N2][N3][N4][N5][N6][N7][N8]> |
| 248 | { |
| 249 | /*! number of elements |
| 250 | * |
| 251 | * \return the number of elements as N1*N2*N3*......... |
| 252 | * |
| 253 | */ |
| 254 | static inline size_t mul() |
| 255 | { |
| 256 | return N1 * N2 * N3 * N4 * N5 * N6 * N7 * N8; |
| 257 | } |
| 258 | |
| 259 | /*! number of indexes |
| 260 | * |
| 261 | * \return 8 |
| 262 | * |
| 263 | */ |
| 264 | static inline size_t dim() |
| 265 | { |
| 266 | return 8; |
| 267 | } |
| 268 | }; |
| 269 | |
| 270 | //! Partial specialization for N=9 |
| 271 | template<typename T,size_t N1,size_t N2,size_t N3,size_t N4,size_t N5, size_t N6, size_t N7, size_t N8, size_t N9> |
| 272 | struct extends<T[N1][N2][N3][N4][N5][N6][N7][N8][N9]> |
| 273 | { |
| 274 | /*! number of elements |
| 275 | * |
| 276 | * \return the number of elements as N1*N2*N3*......... |
| 277 | * |
| 278 | */ |
| 279 | static inline size_t mul() |
| 280 | { |
| 281 | return N1 * N2 * N3 * N4 * N5 * N6 * N7 * N8 * N9; |
| 282 | } |
| 283 | |
| 284 | /*! number of indexes |
| 285 | * |
| 286 | * \return 9 |
| 287 | * |
| 288 | */ |
| 289 | static inline size_t dim() |
| 290 | { |
| 291 | return 9; |
| 292 | } |
| 293 | }; |
| 294 | |
| 295 | //! Partial specialization for N=10 |
| 296 | template<typename T,size_t N1,size_t N2,size_t N3,size_t N4,size_t N5, size_t N6, size_t N7, size_t N8, size_t N9, size_t N10> |
| 297 | struct extends<T[N1][N2][N3][N4][N5][N6][N7][N8][N9][N10]> |
| 298 | { |
| 299 | /*! number of elements |
| 300 | * |
| 301 | * \return the number of elements as N1*N2*N3*......... |
| 302 | * |
| 303 | */ |
| 304 | static inline size_t mul() |
| 305 | { |
| 306 | return N1 * N2 * N3 * N4 * N5 * N6 * N7 * N8 * N9 * N10; |
| 307 | } |
| 308 | |
| 309 | /*! number of indexes |
| 310 | * |
| 311 | * \return 10 |
| 312 | * |
| 313 | */ |
| 314 | static inline size_t dim() |
| 315 | { |
| 316 | return 10; |
| 317 | } |
| 318 | }; |
| 319 | |
| 320 | ///////////////////// Copy grid extends |
| 321 | |
| 322 | /*! \brief Classes to copy each component into a grid and add to the VTKWriter the grid |
| 323 | * |
| 324 | * \param T property to write |
| 325 | * \param dim dimansionality |
| 326 | * \param St type of space |
| 327 | * \param VTK VTK writer |
| 328 | * |
| 329 | */ |
| 330 | template<typename T> |
| 331 | struct write_stag |
| 332 | { |
| 333 | /*! \brief write the staggered grid |
| 334 | * |
| 335 | * \tparam p_val property we are going to write |
| 336 | * \tparam sg staggered grid type |
| 337 | * \tparam v_g vector of grids |
| 338 | * |
| 339 | * \param st_g staggered grid |
| 340 | * \param v_g vector of grids |
| 341 | * \param lg local grid of the staggered grid we are writing |
| 342 | * |
| 343 | */ |
| 344 | template<unsigned int p_val, typename sg, typename v_g> static inline void write(sg & st_g, v_g & vg,size_t lg) |
| 345 | { |
| 346 | // Add a grid; |
| 347 | vg.add(); |
| 348 | size_t k = vg.size() - 1; |
| 349 | |
| 350 | // Get the source and destination grid |
| 351 | auto & g_src = st_g.get_loc_grid(lg); |
| 352 | auto & g_dst = vg.get(k); |
| 353 | |
| 354 | // Set dimensions and memory |
| 355 | g_dst.resize(g_src.getGrid().getSize()); |
| 356 | |
| 357 | // copy |
| 358 | |
| 359 | auto it = vg.get(k).getIterator(); |
| 360 | |
| 361 | while(it.isNext()) |
| 362 | { |
| 363 | g_dst.template get<0>(it.get()) = g_src.template get<p_val>(it.get()); |
| 364 | |
| 365 | ++it; |
| 366 | } |
| 367 | } |
| 368 | }; |
| 369 | |
| 370 | /*! \brief for each component add a grid fill it, and add to the VTK writer |
| 371 | * |
| 372 | * \param T Property to copy |
| 373 | * \param N1 number of components |
| 374 | * |
| 375 | */ |
| 376 | template<typename T,size_t N1> |
| 377 | struct write_stag<T[N1]> |
| 378 | { |
| 379 | /*! \brief write the staggered grid |
| 380 | * |
| 381 | * \tparam p_val property we are going to write |
| 382 | * \tparam sg staggered grid type |
| 383 | * \tparam v_g vector of grids |
| 384 | * |
| 385 | * \param st_g staggered grid |
| 386 | * \param v_g vector of grids |
| 387 | * \param lg local grid of the staggered grid we are writing |
| 388 | * |
| 389 | */ |
| 390 | template<unsigned int p_val, typename sg, typename v_g> static inline void write(sg & st_g, v_g & vg,size_t lg) |
| 391 | { |
| 392 | for (size_t i = 0 ; i < N1 ; i++) |
| 393 | { |
| 394 | // Add a grid; |
| 395 | vg.add(); |
| 396 | size_t k = vg.size() - 1; |
| 397 | |
| 398 | // Get the source and destination grid |
| 399 | auto & g_src = st_g.get_loc_grid(lg); |
| 400 | auto & g_dst = vg.get(k); |
| 401 | |
| 402 | // Set dimensions and memory |
| 403 | g_dst.resize(g_src.getGrid().getSize()); |
| 404 | |
| 405 | auto it = vg.get(k).getIterator(); |
| 406 | |
| 407 | while(it.isNext()) |
| 408 | { |
| 409 | g_dst.template get<0>(it.get()) = g_src.template get<p_val>(it.get())[i]; |
| 410 | |
| 411 | ++it; |
| 412 | } |
| 413 | } |
| 414 | } |
| 415 | }; |
| 416 | |
| 417 | //! Partial specialization for N=2 2D-Array |
| 418 | template<typename T,size_t N1,size_t N2> |
| 419 | struct write_stag<T[N1][N2]> |
| 420 | { |
| 421 | /*! \brief write the staggered grid |
| 422 | * |
| 423 | * \tparam p_val property we are going to write |
| 424 | * \tparam sg staggered grid type |
| 425 | * \tparam v_g vector of grids |
| 426 | * |
| 427 | * \param st_g staggered grid |
| 428 | * \param v_g vector of grids |
| 429 | * \param lg local grid of the staggered grid we are writing |
| 430 | * |
| 431 | */ |
| 432 | template<unsigned int p_val, typename sg, typename v_g> static inline void write(sg & st_g, v_g & vg,size_t lg) |
| 433 | { |
| 434 | for (size_t i = 0 ; i < N1 ; i++) |
| 435 | { |
| 436 | for (size_t j = 0 ; j < N2 ; j++) |
| 437 | { |
| 438 | // Add a grid; |
| 439 | vg.add(); |
| 440 | size_t k = vg.size() - 1; |
| 441 | |
| 442 | // Set dimensions and memory |
| 443 | vg.get(k).resize(st_g.get_loc_grid(lg).getGrid().getSize()); |
| 444 | |
| 445 | // copy |
| 446 | auto & g_src = st_g.get_loc_grid(lg); |
| 447 | auto & g_dst = vg.get(k); |
| 448 | auto it = vg.get(k).getIterator(); |
| 449 | |
| 450 | while(it.isNext()) |
| 451 | { |
| 452 | g_dst.template get<0>(it.get()) = g_src.template get<p_val>(it.get())[i][j]; |
| 453 | |
| 454 | ++it; |
| 455 | } |
| 456 | } |
| 457 | } |
| 458 | } |
| 459 | }; |
| 460 | |
| 461 | ///////////////////// Staggered default positioning //////////////////////// |
| 462 | |
| 463 | /*! \brief this class is a functor for "for_each" algorithm |
| 464 | * |
| 465 | * For each element of the boost::vector the operator() is called. |
| 466 | * Is mainly used to produce a default position vector for each |
| 467 | * property |
| 468 | * |
| 469 | * \tparam dim dimensionality |
| 470 | * \tparam v boost::fusion::vector of properties |
| 471 | * \tparam has_posMask case when v has a position mask |
| 472 | * |
| 473 | */ |
| 474 | |
| 475 | template<unsigned int dim, typename v, bool has_pM = has_posMask<v>::value> |
| 476 | class stag_set_position |
| 477 | { |
| 478 | //! vector containing the position of the properties in the cells (staggered properties are staggered) |
| 479 | // within the cell |
| 480 | openfpm::vector<comb<dim>> (& pos_prp)[boost::fusion::result_of::size<v>::type::value]; |
| 481 | |
| 482 | public: |
| 483 | |
| 484 | /*! \brief Constructor |
| 485 | * |
| 486 | * \param vector of the staggered position (It is going to be filled by this class) |
| 487 | * |
| 488 | */ |
| 489 | stag_set_position( openfpm::vector<comb<dim>> (& pos_prp)[boost::fusion::result_of::size<v>::type::value]) |
| 490 | :pos_prp(pos_prp) |
| 491 | {} |
| 492 | |
| 493 | /*! It calculate the staggered position for every property |
| 494 | * |
| 495 | * \param t property |
| 496 | * |
| 497 | */ |
| 498 | template<typename T> |
| 499 | void operator()(T& t) const |
| 500 | { |
| 501 | // This is the type of the object we have to copy |
| 502 | typedef typename boost::mpl::at<v,typename boost::mpl::int_<T::value>>::type prop; |
| 503 | |
| 504 | bool val = prop::stag_pos_mask[T::value]; |
| 505 | |
| 506 | if (val == false) |
| 507 | return; |
| 508 | |
| 509 | // Dimension of the object |
| 510 | size_t dim_prp = extends<prop>::dim(); |
| 511 | |
| 512 | // It is a scalar |
| 513 | if (dim_prp == 0) |
| 514 | { |
| 515 | comb<dim> c; |
| 516 | c.zero(); |
| 517 | |
| 518 | // It stay in the center |
| 519 | pos_prp[T::value].add(c); |
| 520 | } |
| 521 | else if (dim_prp == 1) |
| 522 | { |
| 523 | // It stay on the object of dimension dim-1 (Negative part) |
| 524 | for (size_t i = 0 ; i < dim ; i++) |
| 525 | { |
| 526 | comb<dim> c; |
| 527 | c.zero(); |
| 528 | c.value(i) = -1; |
| 529 | |
| 530 | pos_prp[T::value].add(c); |
| 531 | } |
| 532 | } |
| 533 | else if (dim_prp == 2) |
| 534 | { |
| 535 | // Create an hypercube object |
| 536 | HyperCube<dim> hyp; |
| 537 | |
| 538 | // Diagonal part live in |
| 539 | for (size_t i = 0 ; i < dim ; i++) |
| 540 | { |
| 541 | comb<dim> c1 = pos_prp[T::value-1].get(i); |
| 542 | for (size_t j = 0 ; j < dim ; j++) |
| 543 | { |
| 544 | comb<dim> c2; |
| 545 | c2.zero(); |
| 546 | c2.value(i) = 1; |
| 547 | |
| 548 | comb<dim> c_res = (c1 + c2) & 0x1; |
| 549 | |
| 550 | pos_prp[T::value].add(c_res); |
| 551 | } |
| 552 | } |
| 553 | } |
| 554 | else if (dim_prp > 2) |
| 555 | { |
| 556 | std::cerr << __FILE__ << ":" << __LINE__ << " Tensor of rank bigger than 2 are not supported" ; |
| 557 | } |
| 558 | } |
| 559 | }; |
| 560 | |
| 561 | ///////////////////// Staggered default positioning //////////////////////// |
| 562 | |
| 563 | /*! \brief this class is a functor for "for_each" algorithm |
| 564 | * |
| 565 | * For each element of the boost::vector the operator() is called. |
| 566 | * Is mainly used to produce a default position vector for each |
| 567 | * property |
| 568 | * |
| 569 | * \tparam vector of properties |
| 570 | * |
| 571 | */ |
| 572 | |
| 573 | template<unsigned int dim, typename v> |
| 574 | class stag_set_position<dim,v,false> |
| 575 | { |
| 576 | private: |
| 577 | |
| 578 | //! vector containing the position of the properties in the cells (staggered properties are staggered) |
| 579 | // within the cell |
| 580 | openfpm::vector<comb<dim>> (& pos_prp)[boost::fusion::result_of::size<v>::type::value]; |
| 581 | |
| 582 | |
| 583 | public: |
| 584 | |
| 585 | /*! \brief Constructor |
| 586 | * |
| 587 | * \param vector of the staggered position (It is going to be filled by this class) |
| 588 | * |
| 589 | */ |
| 590 | stag_set_position( openfpm::vector<comb<dim>> (& pos_prp)[boost::fusion::result_of::size<v>::type::value]) |
| 591 | :pos_prp(pos_prp) |
| 592 | {} |
| 593 | |
| 594 | /*! It calculate the staggered position for every property |
| 595 | * |
| 596 | * \param t property |
| 597 | * |
| 598 | */ |
| 599 | template<typename T> |
| 600 | void operator()(T& t) const |
| 601 | { |
| 602 | // This is the type of the object we have to copy |
| 603 | typedef typename boost::mpl::at<v,typename boost::mpl::int_<T::value>>::type prop; |
| 604 | |
| 605 | // Dimension of the object |
| 606 | size_t dim_prp = extends<prop>::dim(); |
| 607 | |
| 608 | // It is a scalar |
| 609 | if (dim_prp == 0) |
| 610 | { |
| 611 | comb<dim> c; |
| 612 | c.zero(); |
| 613 | |
| 614 | // It stay in the center |
| 615 | pos_prp[T::value].add(c); |
| 616 | } |
| 617 | else if (dim_prp == 1) |
| 618 | { |
| 619 | // It stay on the object of dimension dim-1 (Negative part) |
| 620 | for (size_t i = 0 ; i < dim ; i++) |
| 621 | { |
| 622 | comb<dim> c; |
| 623 | c.zero(); |
| 624 | c.getComb()[i] = -1; |
| 625 | |
| 626 | pos_prp[T::value].add(c); |
| 627 | } |
| 628 | } |
| 629 | else if (dim_prp == 2) |
| 630 | { |
| 631 | // Diagonal part live in |
| 632 | for (size_t i = 0 ; i < dim ; i++) |
| 633 | { |
| 634 | comb<dim> c1 = pos_prp[T::value-1].get(i); |
| 635 | for (size_t j = 0 ; j < dim ; j++) |
| 636 | { |
| 637 | comb<dim> c2; |
| 638 | c2.zero(); |
| 639 | c2.getComb()[j] = 1; |
| 640 | |
| 641 | comb<dim> c_res = (c2 + c1).flip(); |
| 642 | |
| 643 | pos_prp[T::value].add(c_res); |
| 644 | } |
| 645 | } |
| 646 | } |
| 647 | else if (dim_prp > 2) |
| 648 | { |
| 649 | std::cerr << __FILE__ << ":" << __LINE__ << " Tensor of rank bigger than 2 are not supported" ; |
| 650 | } |
| 651 | } |
| 652 | }; |
| 653 | |
| 654 | /*! \brief It create separated grid for each properties to write them into a file |
| 655 | * |
| 656 | * \tparam dim dimensionality of the grids |
| 657 | * \tparam obj type object to print, must be in OpenFPM format |
| 658 | * |
| 659 | */ |
| 660 | template<unsigned int dim, typename st_grid, typename St> |
| 661 | class stag_create_and_add_grid |
| 662 | { |
| 663 | |
| 664 | size_t p_id; |
| 665 | |
| 666 | // staggered grid to write |
| 667 | st_grid & st_g; |
| 668 | |
| 669 | public: |
| 670 | |
| 671 | /*! \brief Constructor |
| 672 | * |
| 673 | * \param st_g staggered grid |
| 674 | * \param p_id process id |
| 675 | * |
| 676 | */ |
| 677 | stag_create_and_add_grid(st_grid & st_g, size_t p_id) |
| 678 | :p_id(p_id),st_g(st_g) |
| 679 | {} |
| 680 | |
| 681 | template<unsigned int p_val> void out_normal() |
| 682 | { |
| 683 | // property type |
| 684 | typedef typename boost::mpl::at< typename st_grid::value_type::type , typename boost::mpl::int_<p_val> >::type ele; |
| 685 | |
| 686 | // create an openfpm format object from the property type |
| 687 | typedef object<typename boost::fusion::vector<ele>> d_object; |
| 688 | |
| 689 | VTKWriter<boost::mpl::pair<grid_cpu<dim, d_object >,St>,VECTOR_GRIDS> vtk_w; |
| 690 | |
| 691 | // Create a vector of grids |
| 692 | |
| 693 | openfpm::vector< grid_cpu<dim, d_object > > vg(st_g.getN_loc_grid()); |
| 694 | |
| 695 | // for each domain grid |
| 696 | for (size_t i = 0 ; i < vg.size() ; i++) |
| 697 | { |
| 698 | // Set dimansions and memory |
| 699 | vg.get(i).resize(st_g.get_loc_grid(i).getGrid().getSize()); |
| 700 | |
| 701 | auto & g_src = st_g.get_loc_grid(i); |
| 702 | auto & g_dst = vg.get(i); |
| 703 | |
| 704 | auto it = vg.get(i).getIterator(); |
| 705 | |
| 706 | while(it.isNext()) |
| 707 | { |
| 708 | object_si_d< decltype(g_src.get_o(it.get())),decltype(g_dst.get_o(it.get())) ,OBJ_ENCAP,p_val>(g_src.get_o(it.get()),g_dst.get_o(it.get())); |
| 709 | |
| 710 | ++it; |
| 711 | } |
| 712 | |
| 713 | Point<dim,St> offset = st_g.getOffset(i); |
| 714 | Point<dim,St> spacing = st_g.getSpacing(); |
| 715 | Box<dim,size_t> dom = st_g.getDomain(i); |
| 716 | |
| 717 | vtk_w.add(g_dst,offset,spacing,dom); |
| 718 | } |
| 719 | |
| 720 | vtk_w.write("vtk_grids_st_" + std::to_string(p_id) + "_" + std::to_string(p_val) + ".vtk" ); |
| 721 | } |
| 722 | |
| 723 | template<unsigned int p_val> void out_staggered() |
| 724 | { |
| 725 | // property type |
| 726 | typedef typename boost::mpl::at< typename st_grid::value_type::type , typename boost::mpl::int_<p_val> >::type ele; |
| 727 | |
| 728 | // Eliminate the extends |
| 729 | typedef typename std::remove_all_extents<ele>::type r_ele; |
| 730 | |
| 731 | // create an openfpm format object from the property type |
| 732 | typedef object<typename boost::fusion::vector<r_ele>> d_object; |
| 733 | |
| 734 | VTKWriter<boost::mpl::pair<grid_cpu<dim, d_object >,St>,VECTOR_ST_GRIDS> vtk_w; |
| 735 | |
| 736 | // Create a vector of grids |
| 737 | openfpm::vector< grid_cpu<dim, d_object > > vg; |
| 738 | vg.reserve(st_g.getN_loc_grid() * extends<ele>::mul()); |
| 739 | |
| 740 | size_t k = 0; |
| 741 | |
| 742 | // for each domain grid |
| 743 | for (size_t i = 0 ; i < st_g.getN_loc_grid() ; i++) |
| 744 | { |
| 745 | write_stag<ele>::template write<p_val, st_grid,openfpm::vector< grid_cpu<dim, d_object > > >(st_g,vg,i); |
| 746 | |
| 747 | // for each component |
| 748 | for ( ; k < vg.size() ; k++) |
| 749 | { |
| 750 | Point<dim,St> offset = st_g.getOffset(i); |
| 751 | Point<dim,St> spacing = st_g.getSpacing(); |
| 752 | Box<dim,size_t> dom = st_g.getDomain(i); |
| 753 | |
| 754 | vtk_w.add(i,vg.get(k),offset,spacing,dom,st_g.c_prp[p_val].get(k)); |
| 755 | } |
| 756 | |
| 757 | k = vg.size(); |
| 758 | } |
| 759 | |
| 760 | vtk_write<typename st_grid::value_type,VTKWriter<boost::mpl::pair<grid_cpu<dim, d_object >,St>,VECTOR_ST_GRIDS>> v(vtk_w,"vtk_grids_st_" + std::to_string(p_id),p_val); |
| 761 | } |
| 762 | |
| 763 | //! It call the copy function for each property |
| 764 | template<typename T> |
| 765 | void operator()(T& t) |
| 766 | { |
| 767 | if (st_g.is_staggered_prop(T::value) == false) |
| 768 | out_normal<T::value>(); |
| 769 | else |
| 770 | out_staggered<T::value>(); |
| 771 | } |
| 772 | }; |
| 773 | |
| 774 | /*! \brief Check that the size of the iterators match |
| 775 | * |
| 776 | * It check the the boxes that the sub iterator defines has same dimensions, for example |
| 777 | * if the first sub-iterator, iterate from (1,1) to (5,3) and the second from (2,2) to (6,4) |
| 778 | * they match (2,2) to (4,6) they do not match |
| 779 | * |
| 780 | * \tparam Grid_map type of the map grid |
| 781 | * \tparam Grid_dst type of the destination grid |
| 782 | * |
| 783 | * \param it1 Iterator1 |
| 784 | * \param it2 Iterator2 |
| 785 | * |
| 786 | * \return true if they match |
| 787 | * |
| 788 | */ |
| 789 | template<typename Eqs_sys, typename it1_type, typename it2_type> bool checkIterator(const it1_type & it1, const it2_type & it2) |
| 790 | { |
| 791 | #ifdef SE_CLASS1 |
| 792 | |
| 793 | grid_key_dx<Eqs_sys::dims> it1_k = it1.getStop() - it1.getStart(); |
| 794 | grid_key_dx<Eqs_sys::dims> it2_k = it2.getStop() - it2.getStart(); |
| 795 | |
| 796 | for (size_t i = 0 ; i < Eqs_sys::dims ; i++) |
| 797 | { |
| 798 | if (it1_k.get(i) != it2_k.get(i)) |
| 799 | { |
| 800 | std::cerr << __FILE__ << ":" << __LINE__ << " error src iterator and destination iterator does not match in size\n" ; |
| 801 | return false; |
| 802 | } |
| 803 | } |
| 804 | |
| 805 | return true; |
| 806 | #else |
| 807 | |
| 808 | return true; |
| 809 | |
| 810 | #endif |
| 811 | } |
| 812 | |
| 813 | /*! \brief this class is a functor for "for_each" algorithm |
| 814 | * |
| 815 | * This class is a functor for "for_each" algorithm. For each |
| 816 | * element of the boost::vector the operator() is called. |
| 817 | * Is mainly used to calculate the interpolation points for each |
| 818 | * property in a staggered grid |
| 819 | * |
| 820 | * \tparam dim Dimensionality |
| 821 | * \tparam v_prp_id vector of properties id |
| 822 | * \tparam v_prp_type vector with the properties |
| 823 | * |
| 824 | */ |
| 825 | template<unsigned int dim, unsigned int n_prop, typename v_prp_id, typename v_prp_type> |
| 826 | struct interp_points |
| 827 | { |
| 828 | /*#ifdef SE_CLASS3 |
| 829 | |
| 830 | // number of properties we are processing |
| 831 | typedef boost::mpl::size<v_prp_id> v_size_old; |
| 832 | |
| 833 | typedef boost::mpl::int_<v_size_old::value-3> v_size; |
| 834 | |
| 835 | #else*/ |
| 836 | |
| 837 | // number of properties we are processing |
| 838 | typedef boost::mpl::size<v_prp_id> v_size; |
| 839 | |
| 840 | //#endif |
| 841 | |
| 842 | // interpolation points for each property |
| 843 | openfpm::vector<std::vector<comb<dim>>> (& interp_pts)[v_size::value]; |
| 844 | |
| 845 | // staggered position for each property |
| 846 | const openfpm::vector<comb<dim>> (&stag_pos)[n_prop]; |
| 847 | |
| 848 | /*! \brief constructor |
| 849 | * |
| 850 | * It define the copy parameters. |
| 851 | * |
| 852 | * \param inter_pts array that for each property contain the interpolation points for each components |
| 853 | * \param staggered position for each property and components |
| 854 | * |
| 855 | */ |
| 856 | inline interp_points(openfpm::vector<std::vector<comb<dim>>> (& interp_pts)[v_size::value],const openfpm::vector<comb<dim>> (&stag_pos)[n_prop]) |
| 857 | :interp_pts(interp_pts),stag_pos(stag_pos){}; |
| 858 | |
| 859 | //! It call the copy function for each property |
| 860 | template<typename T> |
| 861 | inline void operator()(T& t) |
| 862 | { |
| 863 | // This is the type of the object we have to copy |
| 864 | typedef typename boost::mpl::at_c<v_prp_type,T::value>::type prp_type; |
| 865 | typedef typename boost::mpl::at<v_prp_id,T>::type p_id; |
| 866 | |
| 867 | interp_pts[T::value].resize(stag_pos[p_id::value].size()); |
| 868 | |
| 869 | for (size_t i = 0 ; i < stag_pos[p_id::value].size() ; i++) |
| 870 | { |
| 871 | // Create the interpolation points |
| 872 | interp_pts[T::value].get(i) = SubHyperCube<dim,dim - std::rank<prp_type>::value>::getCombinations_R(stag_pos[p_id::value].get(i),0); |
| 873 | |
| 874 | // interp_point are -1,0,1, map the -1 to 0 and 1 to -1 |
| 875 | for (size_t j = 0 ; j < interp_pts[T::value].get(i).size() ; j++) |
| 876 | { |
| 877 | for (size_t k = 0 ; k < dim ; k++) |
| 878 | interp_pts[T::value].get(i)[j].getComb()[k] = - ((interp_pts[T::value].get(i)[j].getComb()[k] == -1)?0:interp_pts[T::value].get(i)[j].getComb()[k]); |
| 879 | } |
| 880 | } |
| 881 | } |
| 882 | }; |
| 883 | |
| 884 | #endif /* SRC_GRID_STAGGERED_DIST_GRID_UTIL_HPP_ */ |
| 885 | |